Joost Willemse
Projectmanager
- Naam
- Dr. J.J. Willemse
- Telefoon
- +31 71 527 4986
- jwillemse@biology.leidenuniv.nl
Voor meer informatie, zie de Engelse versie.
Supervisor(s)
Projectmanager
- Wiskunde en Natuurwetenschappen
- Instituut Biologie Leiden
- IBL Microbial Sciences
- Zhang L., Ramijan Carmiol A.K., Carrión V.J., Aart L.T. van der, Willemse J.J., Wezel G.P. van & Claessen D. (2020), A novel and conserved cell wall enzyme that can substitute for the Lipid II synthase MurG bioRxiv. [Working paper].
- Willemse J.J., Vaart M. van der, Yang W. & Briegel A. (2020), Mathematical mirroring for identification of local symmetry centers in microscopic images local symmetry detection in FIJI, Microscopy and Microanalysis 26(5): 978-988.
- Aart L.T. van der , Nouioui I., Kloosterman A., Mariano Igual J., Willemse J., Goodfellow M. & Wezel G.P. van (2019), Polyphasic classification of the gifted natural product producer Streptomyces roseifaciens sp. nov., International Journal of Systematic and Evolutionary Microbiology 69(4): 899-908.
- Ramijan Carmiol A.K., Ultee E., Willemse J.J., Zhang Z., Wondergem A.J., Meij A. van der, Heinrich D.M., Briegel A., Wezel G.P. van & Claessen D. (2018), Stress-induced formation of cell wall-deficient cells in filamentous actinomysetes, Nature Communications 9: 5164.
- Meij A. van der, Willemse J.J., Schneijderberg M.A., Geurts R., Raaijmakers J.M. & Wezel G.P. van (2018), Inter- and intracellular colonization of Arabidopsis roots by endophytic actinobacteria and the impact of plant hormones on their antimicrobial activity, Antonie van Leeuwenhoek 111(5): 679-690.
- Dissel M.D. van, Willemse J.J., Zacchetti B., Claessen D., Pier G.B. & Wezel G.P. van (2018), Production of poly-β-1, 6-N-acetylglucosamine by MatAB is required for hyphal aggregation and hydrophilic surface adhesion by Streptomyces, Microbial Cell 5(6): 269-279.
- Willemse J.J., Büke F., Dissel D. van, Grevink S., Claessen D. & Wezel G.P. van (2018), SParticle, an algorithm for the analysis of filamentous microorganisms in submerged cultures, ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY 111(2): 171-182.
- Zhang L., Willemse J.J., Hoskisson P.A. & Wezel G.P. van (2018), Sporulation-specific cell division defects in ylmE mutants of Streptomyces coelicolor are rescued by additional deletion of ylmD, Scientific Reports 8(1): 7328.
- Nouioui I., Rückert C., Willemse J., Wezel G.P. van, Klenk H.-P., Busche T., Kalinowski J., Bredhold H. & Zotchev S.B. (2017), Actinoalloteichus fjordicus sp. nov. isolated from marine sponges: phenotypic, chemotaxonomic and genomic characterisation, ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY 110(12): 1-13.
- Salamaga B., Prajsnar T.K., Jareno-Martinez A., Willemse J.J., Bewley M.A., Chau F., Ben Belkacem T., Meijer A.H., Dockrell D.H., Renshaw S.A. & Mesnage S. (2017), Bacterial size matters: Multiple mechanisms controlling septum cleavage and diplococcus formation are critical for the virulence of the opportunistic pathogen Enterococcus faecalis, PLoS Pathogens 13(7): e1006526.
- Yang W., Willemse J., Sawyer E.B., Lou F., Gong W., Zhang H., Gras S.L., Claessen D. & Perrett S. (2017), The propensity of the bacterial rodlin protein RdlB to form amyloid fibrils determines its function in Streptomyces coelicolor, Scientific Reports 7: 42867.
- Celler K., Koning R.I., Willemse J., Koster A.J. & Wezel G.P. van (2016), Cross-membranes orchestrate compartmentalization and morphogenesis in Streptomyces, NATURE COMMUNICATIONS 7: 11836.
- Zacchetti B., Willemse J.J., Recter B., Dissel M.D. van, Wezel G.P. van, Wösten H.A.B. & Claessen D. (2016), Aggregation of germlings is a major contributing factor towards mycelial heterogeneity of Streptomyces, SCIENTIFIC REPORTS 6: 27045.
- Zhang L., Willemse J., Claessen D. & Wezel G.P. van (2016), SepG coordinates sporulation-specific cell division and nucleoid organization in Streptomyces coelicolor, OPEN BIOLOGY 6(4): 150164.
- Reijer P.M. den, Haisma E.M., Lemmens-den Toom N.A., Willemse J., Koning R.A., Demmers J.A., Dekkers D.H., Rijkers E., El Ghalbzouri A. & Nibbering P.H. (2016), Detection of Alpha-Toxin and Other Virulence Factors in Biofilms of Staphylococcus aureus on Polystyrene and a Human Epidermal Model, PLoS ONE 11(1): e0145722.
- Urem M., Rossum T. van, Bucca G., Moolenaar G.F., Laing E., Swiatek-Połatynska M.A., Willemse J., Tenconi E., Rigali S., Goosen N., Smith C.P. & Wezel G.P. van (2016), OsdR of Streptomyces coelicolor and the dormancy regulator DevR of Mycobacterium tuberculosis control overlapping regulons, MSphere 1(3): e00014-16.
- Yagüe Menéndez P., Willemse J.J., Koning R.I., Rioseras B., López-García M.T., Gonzalez-Quinonez N., Lopez-Iglesias C., Shliaha P.V., Rogowska-Wrzesinska A., Koster A.J., Jensen O.N., Wezel G.P. van & Manteca A. (2016), Subcompartmentalization by cross-membranes during early growth of Streptomyces hyphae, Nature Communications 7: 12467.
- Geneviève Girard, Joost Willemse, Hua Zhu, Dennis Claessen, Kanungnid Bukarasam, Michael Goodfellow & Gilles P van Wezel (2014), Analysis of novel kitasatosporae reveals significant evolutionary changes in conserved developmental genes between Kitasatospora and Streptomyces, ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY 106(2): 365-380.
- Koning R.I., Celler K., Willemse J.J., Bos E., Wezel G.P. van & Koster A.J. (2014), Correlative cryo-fluorescence light microscopy and cryo-electron tomography of Streptomyces, Methods in Cell Biology 124: 217-239.
- Koning R.I., Faas F.G., Boonekamp M., Visser B. de, Janse J., Wiegant J.C.A.G., Breij A. de, Willemse J., Nibbering P.H., Tanke H.J. & Koster A.J. (2014), MAVIS: An integrated system for live microscopy and vitrification., Ultramicroscopy 143: 67-76.
- Chenouard N., Smal I., De Chaumont F., Maska M., Sbalzarini I.F., Gong Y., Cardinale J., Carthel C., Coraluppi S., Winter M., Cohen A.R., Godinez W.J., Rohr K., Kalaidzidis Y., Liang L., Duncan J., Shen H., Xu Y., Magnusson K.E.G., Jaldén J., Blau H.M., Paul-Gilloteaux P., Roudot P., Kervrann C., Waharte F., Tinevez J.Y., Shorte S.L., Willemse J.J., Celler K.A., Wezel G.P. van, Dan H.W., Tsai Y.S., Ortiz de Solórzano C., Olivo-Marin J.C. & Meijering E. (2014), Objective comparison of particle tracking methods, Nature Methods 11(3): 281-289.
- Clark L.C., Seipke R.F., Prieto P., Willemse J.J., Wezel G.P. van, Hutchings M.I. & Hoskisson P.A. (2013), Mammalian cell entry genes in Streptomyces may provide clues to the evolution of bacterial virulence, Scientific Reports 3: 1109.
- Celler K., Wezel van G.P. & Willemse J. (2013), Single Particle Tracking of Dynamically Localizing TatA Complexes in Streptomyces coelicolor, Biochemical and Biophysical Research Communications 438(1): 38-42.
- Yang Y.H., Song E., Willemse J., Park S.H., Kim W.S., Kim E.J., Lee B.R., Kim J.N., Wezel G.P. van & Kim B.G. (2012), A novel function of Streptomyces integration host factor (sIHF) in the control of antibiotic production and sporulation in Streptomyces coelicolor, ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY 101(3): 479 -492.
- Willemse J., Mommaas A.M. & Wezel G.P. van (2012), Constitutive expression of ftsZ overrides the whi developmental genes to initiate sporulation of Streptomyces coelicolor, ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY 101(3): 619 -632.
- Willemse J., Ruban-Osmialowska B., Widdick D., Celler K., Hutchings M.I., Wezel van G.P. & Palmer T. (2012), Dynamic localization of Tat protein transport machinery components in Streptomyces coelicolor, Journal of Bacteriology 194(22): 6272 -6281.
- Barends S., Zehl M., Bialek S., Waal E. de, Traag B., Willemse J., Jensen O., Vijgenboom E. & Wezel G.P van (2010), Transfer--messenger RNA controls the translation of cell-cycle and stress proteins in Streptomyces, EMBO reports 11(2): 119-125.
- Willemse J.J. & Wezel G.P. van (2009), Imaging of Streptomyces coelicolor A3 (2) with reduced autofluorescence reveals a novel stage of FtsZ localization, PLoS ONE 4(1): e242.
- Xu Q., Traag B.A., Willemse J.J., McMullan D., Miller M.D., Elslier M.-A., Abdubek P., Astakhova T., Axelrod H.L., Bakolitsa C., Carlton D., Chen C., Chiu H.-J., Chruszcz M., Clayton T., Das D., Deller M.C., Duan L., Ellrott K., Ernst D., Farr C.L., Feuerhelm J., Grant J.C., Grzechnik A., Grzechnik S.K., Won Han G., Jaroszewski L., Jin K.K., Klock H.E., Knuth M.W., Kozbial P., Sri Krishna S., Kumar A., Marciano D., Minor W., Mommaas A.M., Morse A.T., Nigoghossian E., Nopakun A., Okach L., Oommachen S., Paulsen J., Puckett C., Reyes R., Rife C.L., Sefcovic N., Tien H.J., Trame C.B., Bedeam H. van den, Wang S., Weekes D., Hodgson K.O., Wooley J., Deacon A.M., Godzik A., Lesley S.A., Wilson I.A. & Wezel G.P. van (2009), Structural and Functional Characterizations of SsgB, a Conserved Activator of Developmental Cell Division in Morphologically Complex Actinomycetes, Journal of Biological Chemistry 284: 25268-25279.
- Barends S., Zehl M., Bialek S., De Waal E., Traag B.A., Willemse J., Nørregaard Jensen O., Vijgenboom E. & van Wezel G.P. (2009), Transfer–messenger RNA controls the translation of cell-cycle and stress proteins in Streptomyces, EMBO Reports 11(2): 119-125.
- Willemse J., Kulikova O., De Jong H. & Bisseling T. (2008), A new whole‐mount DNA quantification method and the analysis of nuclear DNA content in the stem‐cell niche of Arabidopsis roots, Plant Journal 55(5): 886-894.
- Noens E.E., Mersinias V., Willemse J., Traag B.A., Laing E., Chater K.F., Smith C.P., Koerten H.K. & Van Wezel G.P. (2007), Loss of the controlled localization of growth stage‐specific cell‐wall synthesis pleiotropically affects developmental gene expression in an ssgA mutant of Streptomyces coelicolor, Molecular Microbiology 64(5): 1244-1259.
- Pouwels J., van der Velden T., Willemse J., Borst J.W., van Lent J., Bisseling T. & Wellink J. (2004), Studies on the origin and structure of tubules made by the movement protein of Cowpea mosaic virus, Journal of General Virology 85(12): 3787-3796.
- Limpens E., Franken C., Smit P., Willemse J., Bisseling T. & Geurts R. (2003), LysM domain receptor kinases regulating rhizobial Nod factor-induced infection, SCIENCE 302(5645): 630-633.
- Shah K., Russinova E., Gadella T.W.J. , Willemse J. & De Vries S.C. (2002), The Arabidopsis kinase-associated protein phosphatase controls internalization of the somatic embryogenesis receptor kinase 1, Genes and Development 16(13): 1707-1720.
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