Roman Koning
- Naam
- R.I. Koning
- ORCID iD
- 0000-0001-6736-7147
- Wolff, G.; Limpens, R.W.A.L.; Zevenhoven-Dobbe, J.C.; Laugks, U.; Zheng, S.; Jong, A.W.M. de; Koning, R.I.; Agard, D.A.; Grunewald, K.; Koster, A.J.; Snijder, E.J. & Barcena, M. (2020), A molecular pore spans the double membrane of the coronavirus replication organelle, Science 369(6509): 1395-+.
- Asbeck, J.S. van; Gravesteijn, G.; Cerfontaine, M.N.; Vreijling, J.P.; Mulder, A.A.; Koning, R.I.; Kruit, M.C.; Bersano, A.; Muir, K.W.; Neilson, S.J.; Meschia, J.F.; Shourav, M.M.I.; Koupparis, A.; Lee, Y.C.; Rifino, N.; Hack, R.J.; Nibbeling, E.A.R.; Oberstein, S.A.J.L. & Rutten, J.W. (2025), Small vessel disease phenotype associated with monoallelic NOTCH3 loss-of-function variants, Neurology 105(6).
- Ramovs, V.; Chen, H.S.; Patra, A.; Tjokrodirijo, R.; Veelen, P. van; Mulder, A.A.; Koning, R.; Stöger, L.; Hubner, C.; Ibañez-Arenas, R.; Catalan, B.M.; Morandé, P.; dell'Oro, R.; Poblete, C.; Schuster, A.; Yubero, M.J.; Palisson, F.; Has, C.; Jongbloed, M.; Fuentes, I.; Mummery, C.L. & Raymond, K. (2025), KLHL24 mutation drives intermediate filament degradation, mitochondrial dysfunction and fibrosis in heart failure patients, Cardiovascular Research 121(17): 2714-2730.
- Li, C.; Enciso-Martinez, A.; Zhu, L.Z.; Rotman, S.A.; Veelen, P.A. van; Koning, R.I.; Mei, H.L. & Dijke, P. ten (2025), Surface-associated proteins on extracellular vesicles remodel the tumor microenvironment by potentiating TGF-β signaling in a contact-dependent manner, Advanced Science 13(8).
- Enciso-Martinez, A.; Loppke, C.; Koene, J.J.; Ebbelaar, J.; Geest, M. van der; , M. los; Boerrigter, E.P.E.M.; Dagil, R.; Gustavsson, T.; Vidal-Calvo, E.E.; Leeuwen, T.G. van; Koning, R.I.; Es, N. van; Salanti, A.; Pol, E. van der; Nieuwland, R.; Agerbaek, M.O. & Dijke, P. ten (2025), Targeting oncofoetal chondroitin sulphate alows identification of tumour-derived extracellular vesicles, Journal of Extracellular Vesicles 14(6).
- Bi, D.D.; Wilhelmy, C.; Unthan, D.; Keil, I.S.; Zhao, B.N.; Kolb, B.; Koning, R.I.; Graewert, M.A.; Wouters, B.; Zwier, R.; Bussmann, J.; Hankemeier, T.; Diken, M.; Haas, H.; Langguth, P.; Barz, M. & Zhang, H.Y. (2024), On the influence of fabrication methods and materials for mRNA-LNP production, Advanced Healthcare Materials 13(26).
- Bloks, N.G.C.; Harissa, Z.; Mazzini, G.; Adkar, S.S.; Dicks, A.R.; Hajmousa, G.; Steward, N.; Koning, R.I.; Mulder, A.; Koning, B.B.R. de; Kloppenburg, M.; Almeida, R.C. de; Ramos, Y.F.M.; Guilak, F. & Meulenbelt, I. (2024), A damaging COL6A3 variant alters the MIR31HG-regulated response of chondrocytes in neocartilage organoids to hyperphysiologic mechanical loading, Advanced Science 11(36).
- Cabukusta, B.; Pauwels, S.B.; Akkermans, J.J.; Blomberg, N.; Mulder, A.A.; Koning, R.; Giera, M. & Neefjes, J. (2024), The ORP9-ORP11 dimer promotes sphingomyelin synthesis, eLife 12.
- Li, C.; Enciso-Martinez, A.; Koning, R.I.; Shahsavari, M. & Dijke, P. ten (2024), TGF-β regulates the release of breast cancer cell-derived extracellular vesicles and the sorting of their protein cargo by downregulating RAB27B expression, Journal of Extracellular Vesicles 13(12).
- Rutten, J.W.; Cerfontaine, M.N.; Dijkstra, K.L.; Mulder, A.A.; Vreijling, J.; Kruit, M.; Koning, R.I.; Bot, S.T. de; Nieuwenhuizen, K.M. van; Baelde, H.J.; Berendse, H.W.; Mei, L.H.; Ruijter, G.J.G.; Baas, F.; Jost, C.R.; Duinen, S.G. van; Nibbeling, E.A.R.; Gravesteijn, G. & Oberstein, S.A.J.L. (2024), Bi-allelic NIT1 variants cause a brain small vessel disease characterized by movement disorders, massively dilated perivascular spaces, and intracerebral hemorrhage, Genetics in Medicine 26(6).
- Jongsma, M.L.M.; Bakker, N.; Voortman, L.M.; Koning, R.I.; Bos, E.; Akkermans, J.J.L.L.; Janssen, L. & Neefjes, J. (2024), Systems mapping of bidirectional endosomal transport through the crowded cell, Current Biology 34(19).
- Szachniewicz, M.M.; Neustrup, M.A.; Eeden, S.J.F. van den; Meijgaarden, K.E. van; Franken, K.L.M.C.; Veen, S. van; Koning, R.I.; Limpens, R.W.A.L.; Geluk, A.; Bouwstra, J.A. & Ottenhoff, T.H.M. (2024), Evaluation of PLGA, lipid-PLGA hybrid nanoparticles, and cationic pH-sensitive liposomes as tuberculosis vaccine delivery systems in a Mycobacterium tuberculosis challenge mouse model , International Journal of Pharmaceutics 666.
- Czukiewska, S.M.; Fan, X.Y.; Mulder, A.A.; Helm, T. van der; Hillenius, S.; Meeren, L. van der; Matorras, R.; Eguizabal, C.; Lei, L.; Koning, R.I. & Lopes, S.M.C.D. (2023), Cell-cell interactions during the formation of primordial follicles in humans, Life Science Alliance 6(11).
- Gent, M.E. van; Kiodsinska, S.N.; Severin, M.; Ali, M.; Doodewaerd, B.R. van; Bos, E.; Koning, R.I.; Drijfhout, J.W.; Nielsen, H.M. & Nibbering, P.H. (2023), Encapsulation into hyaluronic acid-based nanogels improves the selectivity index of the snake cathelicidin Ab-Cath, Nanomedicine: Nanotechnology, Biology and Medicine 52.
- Gent, M.E. van; Baaren, T. van; Klodzinska, S.N.; Ali, M.; Dolezal, N.; Doodewaerd, B.R. van; Bos, E.; Waal, A.M. de; Koning, R.I.; Drijfhout, J.W.; Nielsen, H.M. & Nibbering, P.H. (2023), Encapsulation of SAAP-148 in octenyl succinic anhydride-modified hyaluronic acid nanogels for the treatment of skin wound infections, Pharmaceutics 15(2).
- Kleijn, K.M.A. de; Zuure, W.A.; Straasheijm, K.R.; Martens, M.B.; Avramut, M.C.; Koning, R.I. & Martens, G.J.M. (2023), Human cortical spheroids with a high diversity of innately developing brain cell types, Stem Cell Research and Therapy 14(1).
- Kuipers, M.E.; Nguyen, D.L.; Diepen, A. van; Mes, L.; Bos, E.; Koning, R.I.; Nolte-'t Hoen, E.N.M.; Smits, H.H. & Hokke, C.H. (2023), Life stage-specific glycosylation of extracellular vesicles from Schistosoma mansoni schistosomula and adult worms drives differential interaction with C-type lectin receptors DC-SIGN and MGL, Frontiers in Molecular Biosciences 10.
- Luk, S.J.; Schoppmeyer, R.; Ijsselsteijn, M.E.; Somarakis, A.; Acem, I.; Remst, D.F.G.; Cox, D.T.; Bergen, C.A.M. van; Briaire-de Bruijn, I.; Grönloh, M.L.B.; Meer, W.J. van der; Hawinkels, L.J.A.C.; Koning, R.I.; Bos, E.; Bovée, J.V.M.G.; Miranda, N.F.C.C. de; Szuhai, K.; Buul, J.D. van; Falkenburg, J.H.F. & Heemskerk, M.H.M. (2023), VISTA Expression on Cancer-Associated Endothelium Selectively Prevents T-cell Extravasation, Cancer Immunology Research 11(11): 1480-1492.
- Ali, M.; Gent, M.E. van; Waal, A.M. de; Doodewaerd, B.R. van; Bos, E.; Koning, R.I.; Cordfunke, R.A.; Drijfhout, J.W. & Nibbering, P.H. (2023), Physical and functional characterization of PLGA nanoparticles containing the antimicrobial peptide SAAP-148, International Journal of Molecular Sciences 24(3).
- Cremer, T.; Voortman, L.M.; Bos, E.; Jongsma, M.L.M.; Haar, L.R. ter; Akkermans, J.J.L.L.; Ormeno, C.M.T.; Wijdeven, R.H.; Vries, J. de; Kim, R.Q.; Janssen, G.M.C.; Veelen, P.A. van; Koning, R.I.; Neefjes, J. & Berlin, I. (2023), RNF26 binds perinuclear vimentin filaments to integrate ER and endolysosomal responses to proteotoxic stress, The EMBO Journal 42(18).
- Jorquera-Cordero, C.; Lara, P.; Cruz, L.J.; Schomann, T.; Hofslot, A. van; Carvalho, T.G. de; Guedes, P.M.D.; Creemers, L.; Koning, R.I.; Chan, A.B. & Araujo, R.F. de (2022), Extracellular vesicles from M1-polarized macrophages combined with hyaluronic acid and a beta-Blocker potentiate doxorubicin's antitumor activity by downregulating tumor-associated macrophages in breast cancer, Pharmaceutics 14(5).
- Kuipers, M.E.; Koning, R.I.; Bos, E.; Hokke, C.H.; Smits, H.H. & Nolte-'t Hoen, E.N.M. (2022), Optimized protocol for the isolation of extracellular vesicles from the parasitic worm Schistosoma mansoni with improved purity, concentration, and yield, Journal of Immunology Research 2022.
- Koning, R.I.; Vader, H.; Nugteren, M. van; Grocutt, P.A.; Yang, W.; Renault, L.L.R.; Koster, A.J.; Kamp, A.C.F. & Schwertner, M. (2022), Automated vitrification of cryo-EM samples with controllable sample thickness using suction and real-time optical inspection, Nature Communications 13(1).
- Koning, M.; Dumas, S.J.; Avramut, M.C.; Koning, R.I.; Meta, E.; Lievers, E.; Wiersma, L.E.; Borri, M.; Liang, X.; Xie, L.; Liu, P.; Chen, F.; Lin, L.; Luo, Y.L.; Mulder, J.; Spijker, H.S.; Jaffredo, T.; Berg, B.M. van den; Carmeliet, P.; Berg, C.W. van den & Rabelink, T.J. (2022), Vasculogenesis in kidney organoids upon transplantation, npj Regenerative Medicine 7(1).
- in't Veld, R.V.H.; Lara, P.; Jager, M.J.; Koning, R.I.; Ossendorp, F. & Cruz, L.J. (2022), M1-derived extracellular vesicles enhance photodynamic therapy and promote immunological memory in preclinical models of colon cancer, JOURNAL OF NANOBIOTECHNOLOGY 20(1).
- Zhou X.Q., Mytiliniou M., Hilgendorf J., Zeng Y., Papadopoulou P., Shao Y., Dominguez Maximilian P., Zhang L., Hesselberth M.B.S., Bos E., Siegler M.A., Buda F., Brouwer A.M., Kros A., Koning R.I., Heinrich D. & Bonnet S. (2021), Intracellular dynamic assembly of deep‐red emitting supramolecular nanostructures based on the Pt…Pt metallophilic interaction, Advanced Materials 33(37): 2008613.
- Hoolwerff, M. van; Ruiz, A.R.; Bouma, M.; Suchiman, H.E.D.; Koning, R.I.; Jost, C.R.; Mulder, A.A.; Freund, C.; Guilak, F.; Ramos, Y.F.M. & Meulenbelt, I. (2021), High-impact FN1 mutation decreases chondrogenic potential and affects cartilage deposition via decreased binding to collagen type II, Science Advances 7(45).
- Zhou, X.Q.; Mytiliniou, M.; Hilgendorf, J.; Zeng, Y.; Papadopoulou, P.; Shao, Y.; Dominguez, M.P.; Zhang, L.Y.; Hesselberth, M.B.S.; Bos, E.; Siegler, M.A.; Buda, F.; Brouwer, A.M.; Kros, A.; Koning, R.I.; Heinrich, D. & Bonnet, S. (2021), Intracellular dynamic assembly of deep-red emitting supramolecular nanostructures based on the Pt horizontal ellipsis Pt metallophilic interaction, Advanced Materials 33(37).
- Hoolwerff, M. van; Ruiz, A.R.; Bouma, M.; Suchiman, H.E.D.; Koning, R.I.; Jost, C.R.; Mulder, A.A.; Freund, C.; Guilak, F.; Ramos, Y.F.M. & Meulenbelt, I. (2021), High-impact FN1 mutation decreases chondrogenic potential and affects cartilage deposition via decreased binding to collagen type II, Science Advances 7(45).
- Kat, M.; Karampini, E.; Olins, J.; Mulder, A.A.; Alphen, F. van; Jost, C.R.; Koning, R.I.; Geerts, D.; Biggelaar, M. van den; Margadant, C.; Voorberg, J. & Bierings, R. (2021), SYNTAXIN 5 IS ESSENTIAL FOR GOLGI INTEGRITY, WEIBEL-PALADE BODY BIOGENESIS AND STIMULUS-INDUCED VON WILLEBRAND FACTOR SECRETION FROM ENDOTHELIAL CELLS, Haematologica 106(9): 3-3.
- Liu, S.J.; Gonzalez-Prieto, R.; Zhang, M.D.; Geurink, P.P.; Kooij, R.; Iyengar, P.V.; Dinther, M. van; Bos, E.; Zhang, X.B.; Devedec, S.E. le; Water, B. van de; Koning, R.I.; Zhu, H.J.; Mesker, W.E.; Vertegaal, A.C.O.; Ovaa, H.; Zhang, L.; Martens, J.W.M. & Dijke, P. ten (2020), Deubiquitinase activity profiling identifies UCHL1 as a candidate oncoprotein that promotes TGF beta-induced breast cancer metastasis, Clinical Cancer Research 26(6): 1460-1473.
- Kuipers, M.E.; Nolte-'t Hoen, E.N.M.; Ham, A.J. van der; Ozir-Fazalalikhan, A.; Nguyen, D.L.; Korne, C.M. de; Koning, R.I.; Tomes, J.J.; Hoffmann, K.F.; Smits, H.H. & Hokke, C.H. (2020), DC-SIGN mediated internalisation of glycosylated extracellular vesicles from Schistosoma mansoni increases activation of monocyte-derived dendritic cells, Journal of Extracellular Vesicles 9(1).
- Kuipers, M.E.; Nolte-'t Hoen, E.N.M.; Ham, A.J. van der; Ozir-Fazalalikhan, A.; Nguyen, D.L.; Korne, C.M. de; Koning, R.I.; Tomes, J.J.; Hoffmann, K.F.; Smits, H.H. & Hokke, C.H. (2020), DC-SIGN mediated internalisation of glycosylated extracellular vesicles from Schistosoma mansoni increases activation of monocyte-derived dendritic cells, Journal of Extracellular Vesicles 9(1).
- Deursen, P.M.G. van; Koning, R.I.; Tudor, V.; Moradi, M.A.; Patterson, J.P.; Kros, A.; Sommerdijk, N.A.J.M.; Koster, A.J. & Schneider, G.F. (2020), Graphene liquid cells assembled through loop-assisted transfer method and located with correlated light-electron microscopy, Advanced Functional Materials 30(11).
- Sapmaz, A.; Berlin, I.; Bos, E.; Wijdeven, R.H.; Janssen, H.; Konietzny, R.; Akkermans, J.J.; Erson-Bensan, A.E.; Koning, R.I.; Kessler, B.M.; Neefjes, J. & Ovaa, H. (2019), USP32 regulates late endosomal transport and recycling through deubiquitylation of Rab7, Nature Communications 10.
- Dzialo, E.; Rudnik, M.; Koning, R.I.; Czepiel, M.; Tkacz, K.; Baj-Krzyworzeka, M.; Distler, O.; Siedlar, M.; Kania, G. & Blyszczuk, P. (2019), WNT3a and WNT5a Transported by Exosomes Activate WNT Signaling Pathways in Human Cardiac Fibroblasts, International Journal of Molecular Sciences 20(6).
- Howes, S.C.; Koning, R.I. & Koster, A.J. (2018), Correlative microscopy for structural microbiology, Current Opinion in Microbiology 43: 132-138.
- Ugurlar, D.; Howes, S.C.; Kreuk, B.J. de; Koning, R.I.; Jong, R.N. de; Beurskens, F.J.; Schuurman, J.; Koster, A.J.; Sharp, T.H.; Parren, P.W.H.I. & Gros, P. (2018), Structures of C1-IgG1 provide insights into how danger pattern recognition activates complement, Science 359(6377): 794-797.
- Cornelissen, R.; Boggild, A.; Eachambadi, R.T.; Koning, R.I.; Kremer, A.; Hidalgo-Martinez, S.; Zetsche, E.M.; Damgaard, L.R.; Bonne, R.; Drijkoningen, J.; Geelhoed, J.S.; Boesen, T.; Boschker, H.T.S.; Valcke, R.; Nielsen, L.P.; D'Haen, J.; Manca, J.V. & Meysman, F.J.R. (2018), The Cell Envelope Structure of Cable Bacteria, Frontiers in Microbiology 9.
- Breij, A. de; Riool, M.; Cordfunke, R.A.; Malanovic, N.; Boer, L. de; Koning, R.I.; Ravensbergen, E.; Franken, M.; Heijde, T. van der; Boekema, B.K.; Kwakman, P.H.S.; Kamp, N.; Ghalbzouri, A. el; Lohner, K.; Zaat, S.A.J.; Drijfhout, J.W. & Nibbering, P.H. (2018), The antimicrobial peptide SAAP-148 combats drug-resistant bacteria and biofilms, Science Translational Medicine 10(423).
- Kryshtafovych, A.; Albrecht, R.; Basle, A.; Bule, P.; Caputo, A.T.; Carvalho, A.L.; Chao, K.L.; Diskin, R.; Fidelis, K.; Fontes, C.M.G.A.; Fredslund, F.; Gilbert, H.J.; Goulding, C.W.; Hartmann, M.D.; Hayes, C.S.; Herzberg, O.; Hill, J.C.; Joachimiak, A.; Kohring, G.W.; Koning, R.I.; Leggio, L. lo; Mangiagalli, M.; Michalska, K.; Moult, J.; Najmudin, S.; Nardini, M.; Nardone, V.; Ndeh, D.; Nguyen, T.H.; Pintacuda, G.; Postel, S.; Raaij, M.J. van; Roversi, P.; Shimon, A.; Singh, A.K.; Sundberg, E.J.; Tars, K.; Zitzmann, N. & Schwede, T. (2018), Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016), Proteins: Structure, Function, and Bioinformatics 86(S1): 27-50.
- Koning, R.I.; Koster, A.J. & Sharp, T.H. (2018), Advances in cryo-electron tomography for biology and medicine, Annals of Anatomy 217: 82-96.
- Schie, K.A. van; Kruithof, S.; Ooijevaar-de Heer, P.; Derksen, N.I.L.; Bovenkamp, F.S. van de; Saris, A.; Vidarsson, G.; Bentlage, A.E.H.; Jiskoot, W.; Romeijn, S.; Koning, R.I.; Bos, E.; Stork, E.M.; Koeleman, C.A.M.; Wuhrer, M.; Wolbink, G. & Rispens, T. (2018), Restricted immune activation and internalisation of anti-idiotype complexes between drug and antidrug antibodies, Annals of the Rheumatic Diseases 77(10): 1471-1479.
- , G.S. du; Hathout, R.M.; Nasr, M.; Nejadnik, M.R.; Tu, J.; Koning, R.I.; Koster, A.J.; Slutter, B.; Kros, A.; Jiskoot, W.; Bouwstra, J.A. & Monkare, J. (2017), Intradermal vaccination with hollow microneedles: A comparative study of various protein antigen and adjuvant encapsulated nanoparticles, Journal of Controlled Release 266: 109-118.
- Basu, K.; Lajoie, D.; Aumentado-Armstrong, T.; Chen, J.; Koning, R.I.; Bossy, B.; Bostina, M.; Sik, A.; Bossy-Wetzel, E. & Rouiller, I. (2017), Molecular mechanism of DRP1 assembly studied in vitro by cryo-electron microscopy, PLoS ONE 12(6).
- Lenchenkov, N.S.; Glasbergen, G.; Kruijsdijk, C. van; Vulovic, M.; Bos, E.; Koning, R.I. & Cassiola, F. (2017), Characterisation of the size and swelling kinetics of copolymer nano-spheres extracted from an emulsion, Colloids and Surfaces A: Physicochemical and Engineering Aspects 535: 265-273.
- Celler K., Koning R.I., Willemse J., Koster A.J. & Wezel G.P. van (2016), Cross-membranes orchestrate compartmentalization and morphogenesis in Streptomyces, Nature Communications 7: 11836.
- Celler, K.; Koning, R.I.; Willemse, J.; Koster, A.J. & Wezel, G.P. van (2016), Cross-membranes orchestrate compartmentalization and morphogenesis in Streptomyces, Nature Communications 7.
- Koning, R.I.; Gomez-Blanco, J.; Akopjana, I.; Vargas, J.; Kazaks, A.; Tars, K.; Carazo, J.M. & Koster, A.J. (2016), Asymmetric cryo-EM reconstruction of phage MS2 reveals genome structure in situ, Nature Communications 7.
- Reijer, P.M. den; Haisma, E.M.; Lemmens-den Toom, N.A.; Willemse, J.; Koning, R.A.; Demmers, J.A.A.; Dekkers, D.H.W.; Rijkers, E.; Ghalbzouri, A. el; Nibbering, P.H. & Wamel, W. van (2016), Detection of Alpha-Toxin and Other Virulence Factors in Biofilms of Staphylococcus aureus on Polystyrene and a Human Epidermal Model, PLoS ONE 11(1).
- Yague, P.; Willemse, J.; Koning, R.I.; Rioseras, B.; Lopez-Garcia, M.T.; Gonzalez-Quinonez, N.; Lopez-Iglesias, C.; Shliaha, P.V.; Rogowska-Wrzesinska, A.; Koster, A.J.; Jensen, O.N.; Wezel, G.P. van & Manteca, A. (2016), Subcompartmentalization by cross-membranes during early growth of Streptomyces hyphae, Nature Communications 7.
- Shakeel, S.; Westerhuis, B.M.; Domanska, A.; Koning, R.I.; Matadeen, R.; Koster, A.J.; Bakker, A.Q.; Beaumont, T.; Wolthers, K.C. & Butcher, S.J. (2016), Multiple capsid-stabilizing interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis, Nature Communications 7.
- Shishovs, M.; Rumnieks, J.; Diebolder, C.; Jaudzems, K.; Andreas, L.B.; Stanek, J.; Kazaks, A.; Kotelovica, S.; Akopjana, I.; Pintacuda, G.; Koning, R.I. & Tars, K. (2016), Structure of AP205 Coat Protein Reveals Circular Permutation in ssRNA Bacteriophages, Journal of Molecular Biology 428(21): 4267-4279.
- Askes S.H.C., López Mora N., Harkes R., Koning R.I., Koster B., Schmidt T., Kros A. & Bonnet S.A. (2015), Imaging the lipid bilayer of giant unilamellar vesicles using red-to-blue light upconversion, Chemical Communications 51(44): 9137-9140.
- Askes, S.H.C.; Mora, N.L.; Harkes, R.; Koning, R.I.; Koster, B.; Schmidt, T.; Kros, A. & Bonnet, S. (2015), Imaging the lipid bilayer of giant unilamellar vesicles using red-to-blue light upconversion, Chemical Communications 51(44): 9137-9140.
- Diebolder, C.A.; Faas, F.G.A.; Koster, A.J. & Koning, R.I. (2015), Conical Fourier shell correlation applied to electron tomograms, Journal of Structural Biology 190(2): 215-223.
- Diebolder, C.A.; Halff, E.F.; Koster, A.J.; Huizinga, E.G. & Koning, R.I. (2015), Cryoelectron Tomography of the NAIP5/NLRC4 Inflammasome: Implications for NLR Activation, Structure 23(12): 2349-2357.
- Koning R.I., Faas F.G., Boonekamp M., Visser B. de, Janse J., Wiegant J.C.A.G., Breij A. de, Willemse J., Nibbering P.H., Tanke H.J. & Koster A.J. (2014), MAVIS: An integrated system for live microscopy and vitrification, Ultramicroscopy 143: 67-76.
- Beurskens, F.J.; Diebolder, C.A.; Jong, R. de; Voorhorst, M.; Verploegen, S.; Strumane, K.; Lindorfer, M.A.; Taylor, R.P.; Koning, R.I.; Saphire, E.O.; Burton, D.; Schuurman, J.; Gros, P. & Parren, P.W.H.I. (2014), Enhanced IgG hexamerization mediates efficient C1q docking and more rapid and substantial complement-dependent cytotoxicity; preclinical proof of concept, Molecular Immunology 61(2): 257-257.
- Koning, R.I.; Celler, K.; Willemse, J.; Bos, E.; Wezel, G.P. van; Koster, A.J.; MullerReichert, T. & Verkade, P. (2014), Correlative cryo-fluorescence light microscopy and cryo-electron tomography of streptomyces.
- Koning, R.I.; Faas, F.G.; Boonekamp, M.; Visser, B. de; Janse, J.; Wiegant, J.C.; Breij, A. de; Willemse, J.; Nibbering, P.H.; Tanke, H.J. & Koster, A.J. (2014), MAVIS: An integrated system for live microscopy and vitrification.
- Diebolder, C.A.; Beurskens, F.J.; Jong, R.N. de; Koning, R.I.; Strumane, K.; Lindorfer, M.A.; Voorhorst, M.; Ugurlar, D.; Rosati, S.; Heck, A.J.R.; Winkel, J.G.J. van de; Wilson, I.A.; Koster, A.J.; Taylor, R.P.; Saphire, E.O.; Burton, D.R.; Schuurman, J.; Gros, P. & Parren, P.W.H.I. (2014), Complement Is Activated by IgG Hexamers Assembled at the Cell Surface, Science 343(6176): 1260-1263.
- Celler, K.; Koning, R.I.; Koster, A.J. & Wezel, G.P. van (2013), Multidimensional View of the Bacterial Cytoskeleton, Journal of Bacteriology 195(8): 1627-1636.
- Faas, F.G.A.; Barcena, M.; Agronskaia, A.V.; Gerritsen, H.C.; Moscicka, K.B.; Diebolder, C.A.; Driel, L.F. van; Limpens, R.W.A.L.; Bos, E.; Ravelli, R.B.G.; Koning, R.I. & Koster, A.J. (2013), Localization of fluorescently labeled structures in frozen-hydrated samples using integrated light electron microscopy, Journal of Structural Biology 181(3): 283-290.
- Koning, R.I.; Kutchoukov, V.G.; Hagen, C.W. & Koster, A.J. (2013), Nanofabrication of a gold fiducial array on specimen support for electron tomography., Ultramicroscopy 135: 99-104.
- Janssens, M.; Mulder, A.A.; Smeden, J. van; Pilgram, G.S.K.; Wolterbeek, R.; Lavrijsen, A.P.M.; Koning, R.I.; Koster, A.J. & Bouwstra, J.A. (2013), Electron diffraction study of lipids in non-lesional stratum corneum of atopic eczema patients, BBA - Biomembranes 1828(8): 1814-1821.
- Koning, R.I.; Breij, A. de; Oostergetel, G.T.; Nibbering, P.H.; Koster, A.J. & Dijkshoorn, L. (2013), Cryo-electron tomography analysis of membrane vesicles from Acinetobacter baumannii ATCC19606(T), Research in Microbiology 164(5): 397-405.
- Koning RI & Koster AJ (2013), Cellular nanoimaging by cryo electron tomography., Methods in Molecular Biology 950: 227-51.
- Liu Z., Galli F., Waterreus W.J., Meulenbroek E.M., Koning R.I., Lamers G.E.M., Olsthoorn R.C.L., Pannu N.S., Oosterkamp T.H., Koster A.J., Dame R.T. & Abrahams J.P. (2012), Single-walled carbon nanotubes as scaffolds to concentrate DNA for the study of DNA-protein interactions, ChemPhysChem 13(6): 1569-1575.
- Diebolder, C.A.; Koster, A.J. & Koning, R.I. (2012), Pushing the resolution limits in cryo electron tomography of biological structures, Journal of Microscopy 248(1): 1-5.
- Liu, Z.F.; Galli, F.; Waterreus, W.J.; Meulenbroek, E.; Koning, R.I.; Lamers, G.E.M.; Olsthoorn, R.C.L.; Pannu, N.; Oosterkamp, T.H.; Koster, A.J.; Dame, R.T. & Abrahams, J.P. (2012), Single-walled carbon nanotubes as scaffolds to concentrate DNA for the study of DNA-protein interactions., ChemPhysChem 13(6): 1569-75.
- Diebolder, C.A.; Koning, R.I.; Stutterheim, W.M.; Koster, A.J. & Gros, P. (2011), Cryo electron tomographic visualization of antigen bound antibodies and fitting of atomic models, Molecular Immunology 48(14): 1709-1709.
- Wolinski, H.; Kolb, D.; Hermann, S.; Koning, R.I. & Kohlwein, S.D. (2011), A role for seipin in lipid droplet dynamics and inheritance in yeast, Journal of Cell Science 124(22): 3894-3904.
- Koning, R.I.; Cassimeris, L. & Tran, P. (2010), Cryo-Electron Tomography of Cellular Microtubules, MICROTUBULES: IN VIVO 97: 455-473.
- Jiang LH, Schaffitzel C, Bingel-Erlenmeyer R, Ban N, Korber P, Koning RI, de Geus DC, Plaisier JR & Abrahams JP (2009), Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15, Journal of Molecular Biology 386(5): 1357-1367.
- Graveland-Bikker JF, Koning RI, Koerten HK, Geels RBJ, Heeren RMA & de Kruif CG (2009), Structural characterization of alpha-lactalbumin nanotubes, Soft Matter 5(10): 2020-2026.
- Versluis F, Tomatsu I, Kehr S, Fregonese C, Tepper AWJW, Stuart MCA, Ravoo BJ, Koning RI & Kros A (2009), Shape and Release Control of a Peptide Decorated Vesicle through pH Sensitive Orthogonal Supramolecular Interactions, Journal of the American Chemical Society 131(37): 13186+.
- Janssen BJC, Gomes L, Koning RI, Svergun DI, Koster AJ, Fritzinger DC, Vogel CW & Gros P (2009), Insights into complement convertase formation based on the structure of the factor B-cobra venom factor complex.
- Sepkhanova I, Drescher M, Meeuwenoord NJ, Limpens RWAL, Koning RI, Filippov DV & Huber M (2009), Monitoring Alzheimer Amyloid Peptide Aggregation by EPR, Applied Magnetic Resonance 36(2-4): 209-222.
- Koning RI & Koster AJ (2009), Cryo-electron tomography in biology and medicine, Annals of Anatomy 191(5): 427-445.
- van Driel LF, Valentijn JA, Valentijn KM, Koning RI & Koster AJ (2009), Tools for correlative cryo-fluorescence microscopy and cryo-electron tomography applied to whole mitochondria in human endothelial cells, European Journal of Cell Biology 88(11): 669-684.
- Koning RI, Zovko S, Barcena M, Oostergetel GT, Koerten HK, Galjart N, Koster AJ & Mommaas AM (2008), Cryo electron tomography of vitrified fibroblasts: Microtubule plus ends in situ, Journal of Structural Biology 161(3).
- Schaffitzel C, Oswald M, Berger I, Ishikawa T, Abrahams JP, Koerten HK, Koning RI & Ban N (2007), Structure of the E-coli signal recognition particle bound to a translating ribosome (vol 444, pg 503, 2006), Nature 448(7157): 1076-1076.
- Vries, F.A.T. de; Zonneveld, J.B.M.; Groot, A.J. de; Koning, R.I.; Zeeland, A.A. van & Pastink, A. (2007), Schizosaccharomyces pombe Rad22A and Rad22B have similar biochemical properties and form multimeric structures, Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis 615(1-2).
- van den Worm SHE, Koning RI, Warmenhoven HJ, Koerten HK & van Duin J (2006), Cryo electron microscopy reconstructions of the Leviviridae unveil the densest icosahedral RNA packing possible, Journal of Molecular Biology 363(4).
- Schaffitzel C, Oswald M, Berger I, Ishikawa T, Abrahams JP, Koerten HK, Koning RI & Ban N (2006), Structure of the E-coli signal recognition particle bound to a translating ribosome, Nature 444(7118).
- Plaisier JR, Koning RI, Koerten HK, van Heel M & Abrahams JP (2004), TYSON: Robust searching, sorting, and selecting of single particles in electron micrographs, Journal of Structural Biology 145(1-2).
- Plaisier JR, Koning RI, Koerten HK, van Roon AM, Thomassen EAJ, Kuil ME, Hendrix J, Broennimann C, Pannu NS & Abrahams JP (2003), Area detectors in structural biology, Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment 509(1-3).