593 search results for “n-body simulations” in the Public website
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Sodium ion binding pocket mutations and adenosine A2A receptor function
Source: Mol Pharmacol, Volume 87, Issue 2, pp. 305-13 (2015)
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Prediction of binding kinetics
Supervisor: Gerard van Westen
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Boudewijn Lelieveldt: 'AI can help, but not replace, doctors and other healthcare providers'
‘I would never want to be treated by a computer,’ says Boudewijn Lelieveldt, Head of Radiology at the Laboratory for Clinical and Experimental Image Processing and Medical Delta professor in the Bioinformatics group at Delft University of Technology. No matter how intelligent a system, we have to continue…
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SMALL Savannah : an information system for the integrated analysis of land use change in the Far North of Cameroon
Promotores: W.T. de Groot, M. Tchuenté, Co-promotor: J.P. Cheylan
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Cultural evolutionary modeling of patterns in language change. Exercises in evolutionary linguistics
This thesis describes the use of the evolutionary approach in the study of language change, aiming to provide a better insight in the mechanisms that play a role in language change and to validate this approach in the field of language change.
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Interpreting lithic raw material variability in Middle Palaeolithic contexts
A modeling approach with applications to the Bau de l'Aubesier (Southeastern France)
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Missing data procedures in multivariate analysis
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The Game of Continuity
In what way can the qualities of an existing context be used as guiding and enriching principles rather than limiting factors in the process of spatial transformation?
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Fermions and Bosons: Excitons in strongly correlated materials
Promotors: Prof.dr. J. Zaanen, Prof.dr.ir. H. Hilgenkamp
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PROACT
Modern society is connected through electronic and mobile devices, which we call the Internet of Things (IoT).
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Systems Modelling Lab (SML)
Mathematical models of software systems enable characterizations, abstractions, simulations, and analysis of complex software during its development.
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Education and organisation development
Education and Organisation Development
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Interfacing the past
Computer applications and quantitative methods in archaeology CAA95.
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On the geometry of demixing: A study of lipid phase separation on curved surfaces
Like a mixture of oil and water, lipid membranes separate into two liquid phases.
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Optimization of quantum algorithms for near-term quantum computers
This thesis covers several aspects of quantum algorithms for near-term quantum computers and its applications to quantum chemistry and material science.
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Expertise
The CIGR brings together a diverse range of unique expertise in genome research rooted in biology, chemistry and physics. Members of the CIGR investigate genome folding and genome transactions. An important aspect is direct as well as long term relevance for medicine. The available expertise extends…
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Two-photon luminescence of gold nanorods: applications to single-particle tracking and spectroscopy
Gold nanorods are biocompatible nanoparticles that present an excellent two-photon signal that can be used to get high spatial resolution inside living cells. Gold nanorods are photostable and therefore can be followed inside cells for long time, with possible applications as trackers in live cells.
- Matthieu Schaller Group - Numerical Cosmology
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Helmut Schiessel Group - Theoretical Physics of Life Processes
The group Theoretical Physics of Life Processes, led by Helmut Schiessel, focuses on the physics of chromatin, the DNA-protein complex that fills the nuclei of eukaryotic cells.
- Simulations of electrochemical processes with application to CO2 reduction and hydrogen evolution reaction
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Manipulating molecules with mirrors: multi-scale molecular dynamics simulations of polaritonic chemistry
Lecture
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World news: eleven asteroids on a collision course with Earth
The discovery that eleven asteroids might collide with our Earth has become world news. The research of three Leiden astronomers has appeared on more than 190 news sites worldwide, from America to China. They developed and trained an artificial neural network for this discovery.
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FRESH Lecture: Molecular Dynamics Simulations of Solid-Liquid Interfaces Using High-Dimensional Neural Network Potentials
Lecture
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Focal-plane wavefront sensors for direct exoplanet imaging: Theory, simulations and on-sky demonstrations
PhD defence
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extragalactic gas: predicting properties and detection with the EAGLE simulations
PhD defence
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Semi-Empirical Approach to the Simulation of Molecule-Surface Reaction Dynamics
PhD defence
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X-ray angiography and Optical Coherence Tomography for coronary flow simulation
PhD defence
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Data-driven Predictive Maintenance and Time-Series Applications
Predictive maintenance (PdM) is a maintenance policy that uses the past, current, and prognosticated health condition of an asset to predict when timely maintenance should occur.
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Neutrinos From the Milky Way
Promotor: M. de Jong, Co-Promotor: Samtleben
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Leiden Journal of Pottery Studies 22
Leiden Journal of Pottery Studies 22, 2006
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Electrocatalysis of CO2/CO interconversion and Hydrogen Evolution in Bicarbonate Buffers
Bicarbonate buffer is largely found in nature due to its ability to regulate pH variations around neutral values. As the pH changes, so does the speciation of the buffer.
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Lines in the sand: behaviour of self-organised vegetation patterns in dryland ecosystems
Vast, often populated, areas in dryland ecosystems face the dangers of desertification.
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Lab facilities Cognitive Psychology
Reactions and reaction times in cognitive tasks.
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Pair configurations to molecular activity coefficients: PAC-MAC
This thesis provides an overview of the development of the Pair Configuration to Molecular Activity Coefficient (PAC-MAC) model.
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Geometry of Vegetation Pattern
One of the effects of climate change is the phenomenon of desertification, a process that occurs in semi-arid and arid areas and causes land degradation as well as vegetation loss. Due to the lack of resources, vegetation self-organizes to sustain itself by forming large-scale spatial patterns.
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Astronomy Research (MSc)
The master's specialisation Astronomy Research at Leiden University students focus on astronomical data analysis using models and large-scale simulation, combining the fields of Astronomy, Physics, Mathematics and Computer Science.
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Stellar radio beacons for Galactic astrometry
A century ago, it was unclear whether the stars in the sky were clustered in groups, or widely spread in the universe.
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Mechanical Response of Foams: Elasticity, Plasticity, and Rearrangements
Promotor: M.L. van Hecke
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Anisotropy, multivalency and flexibility-induced effects in colloidal systems
We have studied the impact of particle shape anisotropy, multivalent interactions and flexibility on systems of micron-sized colloidal particles.
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Omics data integration with genome-scale modelling of dopaminergic neuronal metabolism
Parkinson's disease is the second most common neurodegenerative disease in the world. One of its symptoms is the loss of dopaminergic neurons in the substantia nigra pars compacta.
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ELIXIR Systems Biology Community
Making systems biology modelling a central pillar of research in biology
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Knots in plasma
A plasma is an ionized gas with very low electrical resistivity. As such, magnetic field lines are 'frozen in' and move with the fluid. Magnetic field lines that are linked, knotted and tangled, cannot be undone by the fluid motions.
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Foam rheology near the jamming transition
Promotor: M.L. van Hecke, Co-Promotor: B.P. Tighe
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Education
Moot Court: An academic skills training course
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Understanding protein complex formation: The role of charge distribution in the encounter complex
Protein–protein complexes are formed via transient states called encounter complexes that greatly influence the formation of the stereospecific complex.
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Molecular inheritance from cloud to disk: a story of complex organics and accretion shocks
Stars like the sun are born in large molecular clouds existing from gas and dust. During the formation process, the chemical composition of the material can be altered drastically by the changing physical conditions.
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Plant BioDynamics Laboratory
The Plant BioDynamics Lab (PBDL) is a laboratory dedicated to experiments designed to develop and validate quantitative mathematical models of dynamical processes in biology. The principal objective of developing these models is to make quantitative predictions about these processes.
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Aggravating matters: accounting for baryons in cosmological analyses
Three major cosmology-focused missions are planned for the next decade: the Euclid space telescope, the Vera C. Rubin Observatory in Chile, and the Nancy Grace Roman Space Telescope.
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Visual Relation extraction Based on Deep Cross-media Transfer Network
Building a Deep Cross-media Transfer Network to extract visual relations that relieve the problem of insufficient training data for visual tasks.
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Leiden wins best role-play award in the Frits Kalshoven International Humanitarian Law Competition 2023
Every year, the Netherlands Red Cross and Belgian Red Cross-Flanders organise the Frits Kalshoven IHL Competition. This competition aims to provide students with an opportunity to practically engage with IHL, the rules that govern the conduct of war, by attending expert lectures and workshops, engaging…